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The one verses two embryo issue is a tough call, but I'd go with two on the FET for a couple or reasons. First, they are frozen-thawed and that translates into a slightly lower impantation rate. Second, they are Day 6 blastocysts that, again, translates into a slightly lower implantation rate. These two factors make it pretty unlikely that a twin pregnancy would result from a two embryo transfer.
A single chemical pregnancy is not indicative of an immunological problem, so you might be jumping the gun a little bit. The immune testing is expensive and not really necessary in your case (at least at this point). For more information on the available reproductive immune testing, see www.millenova.com or www.repromedix.com.
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